Bibliography (Select References for Volume 3)

Volume 3 — The Matter Spectrum

Standard Model & Data

Navas, S., et al. (Particle Data Group). (2024). "Review of Particle Physics." Physical Review D, 110, 030001.
Mohr, P. J., Newell, D. B., Taylor, B. N., & Tiesinga, E. (2025). "CODATA Recommended Values of the Fundamental Physical Constants: 2022." Reviews of Modern Physics, 97, 025002. DOI: 10.1103/RevModPhys.97.025002.

Algebraic & Geometric Foundations

Kramer, P., & Neri, R. (1984). "On periodic and non-periodic space fillings of E^m obtained by projection." Acta Crystallographica Section A, 40, 580-587.
Atiyah, M. F., Patodi, V. K., & Singer, I. M. (1975). "Spectral asymmetry and Riemannian geometry. I." Mathematical Proceedings of the Cambridge Philosophical Society, 77(1), 43-69.
Baez, J. C. (2002). "The Octonions." Bulletin of the American Mathematical Society, 39(2), 145-205.
Bellissard, J., Herrmann, D. J. L., & Zarrouati, M. (2000). "Hulls of Aperiodic Solids and Gap Labelling Theorems." Directions in Mathematical Quasicrystals, CRM Monograph Series, 13, 207-258.
Connes, A. (1994). Noncommutative Geometry. Academic Press.
Connes, A., & Moscovici, H. (1995). "The Local Index Formula in Noncommutative Geometry." Geometric and Functional Analysis, 5(2), 174-243.
Cuntz, J., & Krieger, W. (1980). "A class of C*-algebras and topological Markov chains." Inventiones Mathematicae, 56(3), 251-268.
Elser, V., & Sloane, N. J. A. (1987). "A highly symmetric four-dimensional quasicrystal." Journal of Physics A: Mathematical and General, 20(18), 6161-6168.
Jackiw, R., & Rebbi, C. (1976). "Solitons with fermion number 1/2." Physical Review D, 13(12), 3398.
Koide, Y. (1983). "A Fermion-Boson Composite Model of Quarks and Leptons." Physics Letters B, 120(1-3), 161-165.
McKay, J. (1980). "Graphs, singularities, and finite groups." Proceedings of Symposia in Pure Mathematics, 37, 183-186.
Senechal, M. (1995). Quasicrystals and Geometry. Cambridge University Press.

Experimental Foundations

Agazie, G., et al. (NANOGrav Collaboration). (2023). "The NANOGrav 15 yr Data Set: Evidence for a Gravitational-wave Background." The Astrophysical Journal Letters, 951(1), L8.
Bulbul, E., et al. (2014). "Detection of an Unidentified Emission Line in the Stacked X-ray Spectrum of Galaxy Clusters." The Astrophysical Journal, 789(1), 13.
de Boissieu, M., et al. (1995). "Diffuse scattering and phason elasticity in the AlPdMn icosahedral phase." Physical Review Letters, 75(1), 89-92.
Dessert, C., Rodd, N. L., & Safdi, B. R. (2020). "The dark matter interpretation of the 3.5-keV line is inconsistent with blank-sky observations." Science, 367(6485), 1465-1467.
Francoual, S., et al. (2006). "Dynamics of phason fluctuations in the i-AlPdMn quasicrystal." Philosophical Magazine, 86(6-8), 1029-1035.
Aharonian, F. A., et al. (Hitomi Collaboration). (2017). "Hitomi Constraints on the 3.5 keV Line in the Perseus Galaxy Cluster." The Astrophysical Journal Letters, 837(1), L15. DOI: 10.3847/2041-8213/aa61fa.
Hore, P. J., & Mouritsen, H. (2016). "The radical-pair mechanism of magnetoreception." Annual Review of Biophysics, 45, 299-344.
Lubensky, T. C., Ramaswamy, S., & Toner, J. (1985). "Hydrodynamics of Icosahedral Quasicrystals." Physical Review B, 32(11), 7444–7452.
Leggett, A. J., & Garg, A. (1985). "Quantum mechanics versus macroscopic realism: Is the flux there when nobody looks?" Physical Review Letters, 54(9), 857-860.
Maeda, K., et al. (2012). "Magnetically sensitive light-induced reactions in cryptochrome are consistent with its proposed role as a magnetoreceptor." Proceedings of the National Academy of Sciences, 109(13), 4774-4779.
Malyshev, D., Neronov, A., & Eckert, D. (2014). "Constraints on 3.55 keV line emission from stacked observations of dwarf spheroidal galaxies." Physical Review D, 90, 103506.
Misra, B., & Sudarshan, E. C. G. (1977). "The Zeno's paradox in quantum theory." Journal of Mathematical Physics, 18(4), 756-763.
Naaman, R., Paltiel, Y., & Waldeck, D. H. (2019). "Chiral molecules and the electron spin." Nature Reviews Chemistry, 3(4), 250–260.
Abdo, A. A., et al. (Fermi LAT & GBM Collaborations). (2009). "A limit on the variation of the speed of light arising from quantum gravity effects." Nature, 462(7271), 331–334.
Riemer-Sørensen, S. (2016). "Constraints on the presence of a 3.55 keV dark matter emission line from Chandra observations of the Milky Way." Astronomy & Astrophysics, 590, A71.
Ritz, T., Adem, S., & Schulten, K. (2000). "A model for photoreceptor-based magnetoreception in birds." Biophysical Journal, 78(2), 707-718.

Volume 3 — The Matter Spectrum

Bibliography (Select References for Volume 3)

Standard Model & Data

Navas, S., et al. (Particle Data Group). (2024). "Review of Particle Physics." Physical Review D, 110, 030001.
Mohr, P. J., Newell, D. B., Taylor, B. N., & Tiesinga, E. (2025). "CODATA Recommended Values of the Fundamental Physical Constants: 2022." Reviews of Modern Physics, 97, 025002. DOI: 10.1103/RevModPhys.97.025002.

Algebraic & Geometric Foundations

Kramer, P., & Neri, R. (1984). "On periodic and non-periodic space fillings of E^m obtained by projection." Acta Crystallographica Section A, 40, 580-587.
Atiyah, M. F., Patodi, V. K., & Singer, I. M. (1975). "Spectral asymmetry and Riemannian geometry. I." Mathematical Proceedings of the Cambridge Philosophical Society, 77(1), 43-69.
Baez, J. C. (2002). "The Octonions." Bulletin of the American Mathematical Society, 39(2), 145-205.
Bellissard, J., Herrmann, D. J. L., & Zarrouati, M. (2000). "Hulls of Aperiodic Solids and Gap Labelling Theorems." Directions in Mathematical Quasicrystals, CRM Monograph Series, 13, 207-258.
Connes, A. (1994). Noncommutative Geometry. Academic Press.
Connes, A., & Moscovici, H. (1995). "The Local Index Formula in Noncommutative Geometry." Geometric and Functional Analysis, 5(2), 174-243.
Cuntz, J., & Krieger, W. (1980). "A class of C*-algebras and topological Markov chains." Inventiones Mathematicae, 56(3), 251-268.
Elser, V., & Sloane, N. J. A. (1987). "A highly symmetric four-dimensional quasicrystal." Journal of Physics A: Mathematical and General, 20(18), 6161-6168.
Jackiw, R., & Rebbi, C. (1976). "Solitons with fermion number 1/2." Physical Review D, 13(12), 3398.
Koide, Y. (1983). "A Fermion-Boson Composite Model of Quarks and Leptons." Physics Letters B, 120(1-3), 161-165.
McKay, J. (1980). "Graphs, singularities, and finite groups." Proceedings of Symposia in Pure Mathematics, 37, 183-186.
Senechal, M. (1995). Quasicrystals and Geometry. Cambridge University Press.

Experimental Foundations

Agazie, G., et al. (NANOGrav Collaboration). (2023). "The NANOGrav 15 yr Data Set: Evidence for a Gravitational-wave Background." The Astrophysical Journal Letters, 951(1), L8.
Bulbul, E., et al. (2014). "Detection of an Unidentified Emission Line in the Stacked X-ray Spectrum of Galaxy Clusters." The Astrophysical Journal, 789(1), 13.
de Boissieu, M., et al. (1995). "Diffuse scattering and phason elasticity in the AlPdMn icosahedral phase." Physical Review Letters, 75(1), 89-92.
Dessert, C., Rodd, N. L., & Safdi, B. R. (2020). "The dark matter interpretation of the 3.5-keV line is inconsistent with blank-sky observations." Science, 367(6485), 1465-1467.
Francoual, S., et al. (2006). "Dynamics of phason fluctuations in the i-AlPdMn quasicrystal." Philosophical Magazine, 86(6-8), 1029-1035.
Aharonian, F. A., et al. (Hitomi Collaboration). (2017). "Hitomi Constraints on the 3.5 keV Line in the Perseus Galaxy Cluster." The Astrophysical Journal Letters, 837(1), L15. DOI: 10.3847/2041-8213/aa61fa.
Hore, P. J., & Mouritsen, H. (2016). "The radical-pair mechanism of magnetoreception." Annual Review of Biophysics, 45, 299-344.
Lubensky, T. C., Ramaswamy, S., & Toner, J. (1985). "Hydrodynamics of Icosahedral Quasicrystals." Physical Review B, 32(11), 7444–7452.
Leggett, A. J., & Garg, A. (1985). "Quantum mechanics versus macroscopic realism: Is the flux there when nobody looks?" Physical Review Letters, 54(9), 857-860.
Maeda, K., et al. (2012). "Magnetically sensitive light-induced reactions in cryptochrome are consistent with its proposed role as a magnetoreceptor." Proceedings of the National Academy of Sciences, 109(13), 4774-4779.
Malyshev, D., Neronov, A., & Eckert, D. (2014). "Constraints on 3.55 keV line emission from stacked observations of dwarf spheroidal galaxies." Physical Review D, 90, 103506.
Misra, B., & Sudarshan, E. C. G. (1977). "The Zeno's paradox in quantum theory." Journal of Mathematical Physics, 18(4), 756-763.
Naaman, R., Paltiel, Y., & Waldeck, D. H. (2019). "Chiral molecules and the electron spin." Nature Reviews Chemistry, 3(4), 250–260.
Abdo, A. A., et al. (Fermi LAT & GBM Collaborations). (2009). "A limit on the variation of the speed of light arising from quantum gravity effects." Nature, 462(7271), 331–334.
Riemer-Sørensen, S. (2016). "Constraints on the presence of a 3.55 keV dark matter emission line from Chandra observations of the Milky Way." Astronomy & Astrophysics, 590, A71.
Ritz, T., Adem, S., & Schulten, K. (2000). "A model for photoreceptor-based magnetoreception in birds." Biophysical Journal, 78(2), 707-718.